Journal: PLoS ONE
Article Title: Amyloid Properties of the Mouse Egg Zona Pellucida
doi: 10.1371/journal.pone.0129907
Figure Lengend Snippet: A) Schematic diagram of mature ZP1, ZP2, and ZP3 with amyloidogenic regions predicted by AmylPred 2 indicated as red bars above the individual domains. Yellow box, trefoil domain. Numbers signify amino acid number. B) Structure based sequence alignment of the ZP polymerization domain of mouse ZP1 (aa 268–541), ZP2 (aa 361–630), and ZP3 (aa 42–305) showing amyloidogenic sites (blue highlighting), as predicted by the Amylpred2 algorithm. Cysteine residues are noted by black boxes. The internal hydrophobic patch (IHP) is indicated by a red box . The β-strand secondary structure based on the crystal structure of chicken ZP3 is noted by orange bars (ZP-N subdomain) and green bars (ZP-C subdomain) above the amino acid sequences . C) Structure based alignment of ZP-N domains in mouse ZP1 (N1, N2), ZP2 (N1-N4), ZP3 (N), abalone VERL repeat 10 (R10) and yeast α-agglutinin/Sag 1p showing predicted amyloidogenic sites in blue highlighting as determined by the AmylPred2 algorithm. The β-strand secondary structure, based on structure of mZP-N is indicated by orange bars above the amino acid sequence . Cysteine residues are noted by black boxes. * , indicate sites essential or important for ZP2-sperm and α-agglutinin-a-agglutinin binding [ , ].
Article Snippet: Samples were electro blotted onto a polyvinylidene difluoride membrane (cat. no. IPVH00010, EMD Millipore, Bedford, MA) and the membrane was blocked for 1 h at RT with shaking in 3% nonfat dry milk in TBST and then incubated overnight with shaking at 4°C with either 0.5 μg/ml rat anti-mouse ZP1 (M1.4, sc-32751, Santa Cruz Biotechnology, Santa Cruz, CA), 0.25 μg/ml rat anti-mouse ZP2 (IE-3, sc-32752, Santa Cruz Biotechnology), or 0.5 μg/ml rabbit anti-human ZP3 (H-300, sc-25802, Santa Cruz Biotechnology) in 3% nonfat dry milk in TBST.
Techniques: Sequencing, Binding Assay